RAxML (Randomized Axelerated Maximum Likelihood) is a program for sequential and parallel Maximum Likelihood based inference of large phylogenetic trees.

• Latest Version: 8.2.0
• Added: June, 2011
• Updated: July, 2015
• Link: https://github.com/stamatak/standard-RAxML

• Show all available versions of RAxML

  module avail RAxML

• Load RAxML module:

  module load RAxML/8.2.0

• Notes from the sysadmin during installation:

  wget https://github.com/stamatak/standard-RAxML/archive/v8.2.0.tar.gz
  tar -xvf v8.2.0.tar.gz
  cd standard-RAxML-8.2.0/
  make -f Makefile.AVX.gcc
  rm *.o
  make -f Makefile.AVX.PTHREADS.gcc
  rm *.o
  module load openmpi/1.8.2
  make -f Makefile.MPI.gcc
  rm *.o
  sudo mkdir -p /export/apps/RAxML/8.2.0/bin
  sudo cp -v raxmlHPC* /export/apps/RAxML/8.2.0/bin/