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quickmerge-software [2019/10/01 18:07] (current)
aorth created
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 +====== quickmerge ======
 +A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies. ​
  
 +===== Information =====
 +
 +  * Latest Version: 0.3
 +  * Added: September, 2019
 +  * Link: https://​github.com/​mahulchak/​quickmerge
 +
 +===== Usage =====
 +
 +See versions of quickmerge which are available:
 +<​code>​$ module avail quickmerge</​code>​
 +
 +Load one version into your environment and run it:
 +<​code>​$ module load quickmerge/​0.3
 +$ quickmerge
 +$ merge_wrapper.py</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ wget https://​github.com/​mahulchak/​quickmerge/​archive/​v0.3.tar.gz
 +$ tar xf v0.3.tar.gz
 +$ cd quickmerge-0.3
 +$ scl enable devtoolset-7 bash
 +$ sudo mkdir -p /​export/​apps/​quickmerge/​0.3
 +$ sudo cp merge_wrapper.py merger/​quickmerge /​export/​apps/​quickmerge/​0.3</​code>​
quickmerge-software.txt · Last modified: 2019/10/01 18:07 by aorth