• Version: 2.3
• Added: September, 2014
• Link: http://bioinf.spbau.ru/en/quast

module avail quast

Notes from the sysadmin during installation:

cd /tmp
wget 'http://downloads.sourceforge.net/project/quast/quast-2.3.tar.gz?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Fquast%2Ffiles%2F&ts=1411971659&use_mirror=tenet' -O quast-2.3.tar.gz
tar xf quast-2.3.tar.gz
sudo mkdir -p /export/apps/quast
sudo cp -rv quast-2.3 /export/apps/quast/2.3
sudo chown -R aorth:aorth /export/apps/quast/2.3
cd /export/apps/quast/2.3
module load python/2.7.6
./metaquast.py --test
cd libs/MUMmer3.23-linux
make
cd ../..
./metaquast.py --test
sudo chown -R root:root /export/apps/quast/2.3

After loading the module, consult the built-in help:

metaquast.py  --help