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presto-software [2017/05/31 00:20]
aorth
presto-software [2020/03/15 14:54] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 0.5.3+  * Version: 0.5.13
   * Added: June, 2016   * Added: June, 2016
-  * Updated: ​May2017 +  * Updated: ​March2020 
-  * Link: http://​presto.readthedocs.io+  * Link: https://​presto.readthedocs.io
  
 ===== Usage ===== ===== Usage =====
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 Load a version of presto into your environment:​ Load a version of presto into your environment:​
-<​code>​$ module load presto/0.5.3</​code>​+<​code>​$ module load presto/0.5.13</​code>​
  
 ===== Installation ====== ===== Installation ======
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 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​$ scl enable devtoolset-bash +<​code>​$ scl enable devtoolset-bash 
-$ module load python/​3.4.3 +$ sudo mkdir -p /​export/​apps/​presto/​0.5.13 
-$ sudo mkdir /​export/​apps/​presto/​0.5.3 +$ sudo chown aorth /​export/​apps/​presto/​0.5.13 
-$ sudo chown aorth /​export/​apps/​presto/​0.5.3 +python3.6m ​-m venv /​export/​apps/​presto/​0.5.13 
-python ​-m venv /​export/​apps/​presto/​0.5.3 +source ​/​export/​apps/​presto/​0.5.13/​bin/​activate 
-/​export/​apps/​presto/​0.5.3/​bin/​activate +$ pip install --upgrade ​setuptools pip
-$ pip install -U pip setuptools +
-pip install -U Cython +
-$ pip install -U numpy scipy pandas biopython+
 $ pip install presto $ pip install presto
-$ sudo chown -R root:root /​export/​apps/​presto/​0.5.3</​code>​+$ sudo chown -R root:root /​export/​apps/​presto/​0.5.13</​code>​
presto-software.1496179236.txt.gz · Last modified: 2017/05/31 00:20 by aorth