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presto-software

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pRESTO

pRESTO is a toolkit for processing raw reads from high-throughput sequencing of lymphocyte repertoires.

Information

Usage

See which versions of presto are available:

$ module avail presto

Load a version of presto into your environment:

$ module load presto/0.5.13

Installation

Notes from the sysadmin during installation:

$ scl enable devtoolset-7 bash
$ sudo mkdir -p /export/apps/presto/0.5.13
$ sudo chown aorth /export/apps/presto/0.5.13
$ python3.6m -m venv /export/apps/presto/0.5.13
$ source /export/apps/presto/0.5.13/bin/activate
$ pip install --upgrade setuptools pip
$ pip install presto
$ sudo chown -R root:root /export/apps/presto/0.5.13
presto-software.txt · Last modified: 2020/03/15 14:54 by aorth