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prank-software [2016/04/25 17:34] joguya [Usage] |
prank-software [2018/01/19 18:32] (current) aorth |
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====== PRANK ====== | ====== PRANK ====== | ||
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PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. | PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. | ||
===== Information ===== | ===== Information ===== | ||
- | * Version: 150803 | + | * Version: 170427 |
* Added: April, 2016 | * Added: April, 2016 | ||
+ | * Updated: January, 2018 | ||
* Link: http://wasabiapp.org/software/prank/ | * Link: http://wasabiapp.org/software/prank/ | ||
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<code>$ module avail prank</code> | <code>$ module avail prank</code> | ||
- | Load & run prank | + | Load one version of prank into your environment and run it: |
- | <code>$ module load prank/150803 | + | <code>$ module load prank/170427 |
$ prank</code> | $ prank</code> | ||
===== Installation ====== | ===== Installation ====== | ||
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Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
<code>$ cd /tmp | <code>$ cd /tmp | ||
- | $ wget http://wasabiapp.org/download/prank/prank.source.150803.tgz | + | $ wget http://wasabiapp.org/download/prank/prank.source.170427.tgz |
- | $ tar -xvf prank.source.150803.tgz | + | $ tar xf prank.source.170427.tgz |
$ cd prank-msa/src | $ cd prank-msa/src | ||
$ make | $ make | ||
- | $ sudo mkdir -p /export/apps/prank/150803 | + | $ sudo mkdir -p /export/apps/prank/170427/bin /export/apps/prank/170427/share/man/man1 |
- | $ sudo cp prank /export/apps/prank/150803/ | + | $ sudo cp prank /export/apps/prank/170427/bin |
- | </code> | + | $ sudo cp prank.1 /export/apps/prank/170427/share/man/man1</code> |