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prank-software [2016/04/25 17:34]
joguya [Usage]
prank-software [2018/01/19 18:32] (current)
aorth
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 ====== PRANK ====== ====== PRANK ======
- 
 PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences.
  
 ===== Information ===== ===== Information =====
  
-  * Version: ​150803+  * Version: ​170427
   * Added: April, 2016   * Added: April, 2016
 +  * Updated: January, 2018
   * Link: http://​wasabiapp.org/​software/​prank/​   * Link: http://​wasabiapp.org/​software/​prank/​
  
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 <​code>​$ module avail prank</​code>​ <​code>​$ module avail prank</​code>​
  
-Load & run prank +Load one version of prank into your environment and run it: 
-<​code>​$ module load prank/150803+<​code>​$ module load prank/170427
 $ prank</​code>​ $ prank</​code>​
  
 ===== Installation ====== ===== Installation ======
- 
 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
 <​code>​$ cd /tmp <​code>​$ cd /tmp
-$ wget http://​wasabiapp.org/​download/​prank/​prank.source.150803.tgz +$ wget http://​wasabiapp.org/​download/​prank/​prank.source.170427.tgz 
-$ tar -xvf prank.source.150803.tgz+$ tar xf prank.source.170427.tgz
 $ cd prank-msa/​src $ cd prank-msa/​src
 $ make $ make
-$ sudo mkdir -p /​export/​apps/​prank/​150803 +$ sudo mkdir -p /​export/​apps/​prank/​170427/bin /​export/​apps/​prank/​170427/​share/​man/​man1 
-$ sudo cp prank /​export/​apps/​prank/​150803+$ sudo cp prank /​export/​apps/​prank/​170427/bin 
-</​code>​+$ sudo cp prank.1 /​export/​apps/​prank/​170427/​share/​man/​man1</​code>​
prank-software.txt · Last modified: 2018/01/19 18:32 by aorth