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prank-software
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prank-software [2016/04/25 17:34] joguya [Usage] |
prank-software [2018/01/19 18:32] (current) aorth |
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| ====== PRANK ====== | ====== PRANK ====== | ||
| - | |||
| PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. | PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 150803 | + | * Version: 170427 |
| * Added: April, 2016 | * Added: April, 2016 | ||
| + | * Updated: January, 2018 | ||
| * Link: http://wasabiapp.org/software/prank/ | * Link: http://wasabiapp.org/software/prank/ | ||
| Line 14: | Line 14: | ||
| <code>$ module avail prank</code> | <code>$ module avail prank</code> | ||
| - | Load & run prank | + | Load one version of prank into your environment and run it: |
| - | <code>$ module load prank/150803 | + | <code>$ module load prank/170427 |
| $ prank</code> | $ prank</code> | ||
| ===== Installation ====== | ===== Installation ====== | ||
| - | |||
| Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
| <code>$ cd /tmp | <code>$ cd /tmp | ||
| - | $ wget http://wasabiapp.org/download/prank/prank.source.150803.tgz | + | $ wget http://wasabiapp.org/download/prank/prank.source.170427.tgz |
| - | $ tar -xvf prank.source.150803.tgz | + | $ tar xf prank.source.170427.tgz |
| $ cd prank-msa/src | $ cd prank-msa/src | ||
| $ make | $ make | ||
| - | $ sudo mkdir -p /export/apps/prank/150803 | + | $ sudo mkdir -p /export/apps/prank/170427/bin /export/apps/prank/170427/share/man/man1 |
| - | $ sudo cp prank /export/apps/prank/150803/ | + | $ sudo cp prank /export/apps/prank/170427/bin |
| - | </code> | + | $ sudo cp prank.1 /export/apps/prank/170427/share/man/man1</code> |
prank-software.txt · Last modified: 2018/01/19 18:32 by aorth
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