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PLINK is a whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner.



See versions of plink which are available:

$ module avail plink

Load one version into your environment and run it:

$ module load plink/2.00-alpha
$ plink2


Notes from the sysadmin during installation:

$ cd /tmp
$ wget
$ sudo mkdir /export/apps/plink/2.00-alpha
$ sudo cp plink2 /export/apps/plink/2.00-alpha

The AVX2 build only runs on one of our compute nodes because the rest are too old. We need to use the less-optimized 64-bit builds. :(

plink-software.1575881705.txt.gz · Last modified: 2019/12/09 08:55 by aorth