User Tools

Site Tools


phyml-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

phyml-software [2014/06/12 12:08]
aorth created
phyml-software [2018/09/16 09:56] (current)
aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: ​20120412 +  * Version: ​3.3.20180621 
-  * Added: ​June2014 +  * Added: ​September2018 
-  * Link: https://code.google.com/p/phyml/+  * Link: https://github.com/stephaneguindon/phyml
  
 ===== Usage ===== ===== Usage =====
  
-=== See versions of phyml which are available ​=== +See versions of phyml which are available
-<​code>​module avail phyml</​code>​+ 
 +<​code>​module avail phyml</​code>​ 
 + 
 +Load one version into your environment and run it: 
 + 
 +<​code>​$ module load phyml/​3.3.20180621 
 +phyml</​code>​
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​https://​github.com/​stephaneguindon/​phyml-downloads/releases/download/​stable/​phyml-20120412.tar.gz +<​code>​$ cd /tmp 
-tar xf phyml-20120412.tar.gz ​-C /tmp/ +$ wget https://​github.com/​stephaneguindon/​phyml/​archive/v3.3.20180621.tar.gz 
-cd /tmp/phyml-20120412 +tar xf v3.3.20180621.tar.gz 
-scl enable devtoolset-1.1 bash +cd phyml-3.3.20180621 
-./configure --prefix=/​export/​apps/​phyml/​20120412 +./​configure ​--enable-phyml ​--prefix=/​export/​apps/​phyml/​3.3.20180621 
-make +make 
-sudo mkdir -p /​export/​apps/​phyml/​20120412 +sudo mkdir -p /​export/​apps/​phyml/​3.3.20180621 
-sudo chown aorth /​export/​apps/​phyml/​20120412 +sudo chown aorth /​export/​apps/​phyml/​3.3.20180621 
-make install +make install 
-sudo chown -R root:root /​export/​apps/​phyml/​20120412 +sudo chown -R root:root /​export/​apps/​phyml/​3.3.20180621</​code>​
-sudo cp -r doc/ examples/ /​export/​apps/​phyml/​20120412/​</​code>​+
phyml-software.1402564130.txt.gz · Last modified: 2014/06/12 12:08 by aorth