User Tools

Site Tools


phyml-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

phyml-software [2014/06/12 12:08] (current)
aorth created
Line 1: Line 1:
 +====== PhyML ======
 +Phylogenetic estimation using Maximum Likelihood.
  
 +===== Information =====
 +
 +  * Version: 20120412
 +  * Added: June, 2014
 +  * Link: https://​code.google.com/​p/​phyml/​
 +
 +===== Usage =====
 +
 +=== See versions of phyml which are available ===
 +<​code>​module avail phyml</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​https://​github.com/​stephaneguindon/​phyml-downloads/​releases/​download/​stable/​phyml-20120412.tar.gz
 +tar xf phyml-20120412.tar.gz -C /tmp/
 +cd /​tmp/​phyml-20120412
 +scl enable devtoolset-1.1 bash
 +./configure --prefix=/​export/​apps/​phyml/​20120412
 +make
 +sudo mkdir -p /​export/​apps/​phyml/​20120412
 +sudo chown aorth /​export/​apps/​phyml/​20120412
 +make install
 +sudo chown -R root:root /​export/​apps/​phyml/​20120412
 +sudo cp -r doc/ examples/ /​export/​apps/​phyml/​20120412/</​code>​
phyml-software.txt · Last modified: 2014/06/12 12:08 by aorth