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phyml-software

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PhyML

Phylogenetic estimation using Maximum Likelihood.

Information

Usage

See versions of phyml which are available:

$ module avail phyml

Load one version into your environment and run it:

$ module load phyml/3.3.20180621
$ phyml

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/stephaneguindon/phyml/archive/v3.3.20180621.tar.gz
$ tar xf v3.3.20180621.tar.gz
$ cd phyml-3.3.20180621
$ ./configure --enable-phyml --prefix=/export/apps/phyml/3.3.20180621
$ make
$ sudo mkdir -p /export/apps/phyml/3.3.20180621
$ sudo chown aorth /export/apps/phyml/3.3.20180621
$ make install
$ sudo chown -R root:root /export/apps/phyml/3.3.20180621
phyml-software.txt · Last modified: 2018/09/16 09:56 by aorth