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pairfq-software [2015/10/08 15:49] (current)
joguya created
Line 1: Line 1:
 +====== pairfq ======
 +Sync paired-end FASTA/Q files and keep singleton reads.
  
 +===== Information =====
 +
 +  * Version: 0.14.4
 +  * Added: October, 2015
 +  * Link: https://​github.com/​sestaton/​Pairfq
 +
 +===== Usage =====
 +
 +See versions of pairfq which are available:
 +<​code>​$ module avail pairfq</​code>​
 +
 +Load and run pairfq:
 +<​code>​$ module load pairfq/​0.14.4
 +$ pairfq</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ wget https://​github.com/​sestaton/​Pairfq/​archive/​v0.14.4.tar.gz
 +$ tar -xvf v0.14.4.tar.gz
 +$ cd Pairfq-0.14.4
 +$ sudo mkdir -p /​export/​apps/​pairfq/​0.14.4
 +$ sudo chown -R joguya:​joguya /​export/​apps/​pairfq/​0.14.4
 +$ module load perl/​5.16.3.1603
 +$ perl Makefile.PL PREFIX=/​export/​apps/​pairfq/​0.14.4
 +$ make
 +$ make test
 +$ make install
 +$ sudo chown -R root:root /​export/​apps/​pairfq/​0.14.4
 +</​code>​
pairfq-software.txt · Last modified: 2015/10/08 15:49 by joguya