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pagan-software [2016/11/22 21:06] (current) joguya created |
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+ | ====== Pagan ====== | ||
+ | Pagan is a general-purpose tool for the alignment of sequence graphs. | ||
+ | |||
+ | ===== Information ===== | ||
+ | |||
+ | * Latest Version: 0.61 | ||
+ | * Added: November, 2016 | ||
+ | * Link: http://wasabiapp.org/software/pagan | ||
+ | | ||
+ | ===== Usage ===== | ||
+ | |||
+ | See which versions of pagan are available: | ||
+ | <code>$ module avail pagan | ||
+ | </code> | ||
+ | |||
+ | Load pagan | ||
+ | <code>$ module load pagan/0.61</code> | ||
+ | |||
+ | ===== Installation ====== | ||
+ | |||
+ | Notes from the sysadmin during installation: | ||
+ | <code> | ||
+ | $ cd /tmp | ||
+ | $ wget http://wasabiapp.org/download/pagan/pagan.linux64.20150723.tgz | ||
+ | $ tar -xvf pagan.linux64.20150723.tgz | ||
+ | $ cd pagan | ||
+ | $ sudo mkdir -p /export/apps/pagan/0.61 | ||
+ | $ sudo cp -rv . /export/apps/pagan/0.61/ | ||
+ | </code> |