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mothur-software [2017/02/08 09:46]
joguya [Information]
mothur-software [2018/03/19 10:14] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest version: 1.39.+  * Latest version: 1.39.5
-  * Updated: February, 2017+
   * Added: October, 2011   * Added: October, 2011
-  * Link: http://​www.mothur.org/​+  ​* Updated: March, 2018 
 +  ​* Link: https://​www.mothur.org/​
  
 ===== Usage ===== ===== Usage =====
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 <​code>​$ module avail mothur</​code>​ <​code>​$ module avail mothur</​code>​
  
-Load and run mothur: +Load and run one version of mothur: 
-<​code>​$ module load mothur/​1.39.1+<​code>​$ module load mothur/​1.39.5
 $ mothur</​code>​ $ mothur</​code>​
  
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 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​ +<​code>​$ cd /tmp 
-- install mothur/​1.39.1 +$ wget https://​github.com/​mothur/​mothur/​releases/​download/v1.39.5/Mothur.linux_64.zip 
-$ cd /tmp +unzip Mothur.linux_64.zip 
-$ wget -qO- https://​github.com/​mothur/​mothur/​archive/v1.39.1.tar.gz | tar xvz +$ sudo cp -mothur /​export/​apps/​mothur/​1.39.5</​code>​
-cd mothur-1.39.1/ +
-$ sudo mkdir -p /​export/​apps/​mothur/1.39.1/ +
-$ sudo chown -R joguya:​joguya ​/​export/​apps/​mothur/​1.39.1/ +
-$ scl enable devtoolset-3 bash +
-$ sed -i '​s#​^BOOST_LIBRARY_DIR=.*$#​BOOST_LIBRARY_DIR=/​export/​apps/​boost/​1.50.0/​lib#​g;​s#​^BOOST_INCLUDE_DIR=.*$#​BOOST_INCLUDE_DIR=/​export/​apps/​boost/​1.50.0/​include#​g'​ Makefile +
-$ make -j4 +
-$ sudo chown -R root:root /​export/​apps/​mothur/​1.39.1/​ +
-</​code>​+
mothur-software.txt · Last modified: 2018/03/19 10:14 by aorth