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mothur offers the ability to go from raw sequences to the generation of visualization tools to describe α and β diversity.
See versions of mothur which are available:
$ module avail mothur
Load and run mothur:
$ module load mothur/1.39.1 $ mothur
Notes from the sysadmin during installation:
$ cd /tmp $ wget https://github.com/mothur/mothur/releases/download/v1.36.1/Mothur.cen_64.zip $ unzip Mothur.cen_64.zip $ cd mothur $ sudo mkdir /export/apps/mothur/1.36 $ sudo cp -r . /export/apps/mothur/1.36/