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mothur-krona-software [2016/08/16 05:27]
joguya created
mothur-krona-software [2016/08/16 06:50] (current)
joguya [Installation]
Line 27: Line 27:
 $ sudo mkdir -p /export/apps/mothur_krona/git-87499a0 $ sudo mkdir -p /export/apps/mothur_krona/git-87499a0
 $ sudo cp LICENSE.txt mothur_krona_XML.py README.md /export/apps/mothur_krona/git-87499a0/ $ sudo cp LICENSE.txt mothur_krona_XML.py README.md /export/apps/mothur_krona/git-87499a0/
 +</code>
 +
 +- install python lxml module—it is required by mothur_krona<code>
 +$ cd /tmp
 +$ wget https://github.com/lxml/lxml/archive/lxml-3.6.1.tar.gz
 +$ tar -xvf lxml-3.6.1.tar.gz
 +$ module load python/2.7.8
 +$ chown -R joguya:joguya /export/apps/python/2.7.8
 +$ python setup.py build
 +$ python setup.py install
 +$ chown -R root:root /export/apps/python/2.7.8
 </code> </code>
  
mothur-krona-software.1471325241.txt.gz · Last modified: 2016/08/16 05:27 by joguya