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mosdepth-software [2020/09/15 12:55] (current)
aorth created
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 +====== mosdepth ======
 +fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing.
  
 +===== Information =====
 +
 +  * Version: 0.2.9
 +  * Added: September, 2020
 +  * Link: https://github.com/brentp/mosdepth
 +
 +===== Usage =====
 +
 +See which versions of mosdepth are available:
 +<code>$ module avail mosdepth</code>
 +
 +Load one version into your environment and run it:
 +<code>$ module load mosdepth/0.2.9
 +$ mosdepth</code>
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:
 +
 +<code>$ cd /tmp
 +$ wget https://github.com/brentp/mosdepth/releases/download/v0.2.9/mosdepth
 +$ sudo mkdir -p /export/apps/mosdepth/0.2.9
 +$ chmod +x mosdepth
 +$ sudo cp mosdepth /export/apps/mosdepth/0.2.9</code>
mosdepth-software.txt · Last modified: 2020/09/15 12:55 by aorth