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mkatari-bioinformatics-august-2013-vcfregion [2015/05/21 13:42]
mkatari created
mkatari-bioinformatics-august-2013-vcfregion [2015/05/21 13:43] (current)
mkatari
Line 6: Line 6:
 Original documentation [[http://samtools.sourceforge.net/tabix.shtml|here]]  Original documentation [[http://samtools.sourceforge.net/tabix.shtml|here]] 
  
 +<code>
 module load tabix module load tabix
  
 bgzip Genotypes2015.annotated.vcf bgzip Genotypes2015.annotated.vcf
  
-tabix -p vcf /home/emasumba/Genotypes2015.annotated.vcf.gz+tabix -p vcf /home/mkatari/Genotypes2015.annotated.vcf.gz
  
-tabix -p vcf /home/emasumba/Genotypes2015.annotated.vcf.gz Chromosome11:5532312-5532957+tabix -p vcf /home/mkatari/Genotypes2015.annotated.vcf.gz Chromosome11:5532312-5532957 
 +</code>
mkatari-bioinformatics-august-2013-vcfregion.1432215744.txt.gz · Last modified: 2015/05/21 13:42 by mkatari