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mkatari-bioinformatics-august-2013-vcfregion [2015/05/21 16:42]
mkatari created
mkatari-bioinformatics-august-2013-vcfregion [2015/05/21 16:43]
mkatari
Line 6: Line 6:
 Original documentation [[http://​samtools.sourceforge.net/​tabix.shtml|here]] ​ Original documentation [[http://​samtools.sourceforge.net/​tabix.shtml|here]] ​
  
 +<​code>​
 module load tabix module load tabix
  
 bgzip Genotypes2015.annotated.vcf bgzip Genotypes2015.annotated.vcf
  
-tabix -p vcf /home/emasumba/​Genotypes2015.annotated.vcf.gz+tabix -p vcf /home/mkatari/​Genotypes2015.annotated.vcf.gz
  
-tabix -p vcf /home/emasumba/​Genotypes2015.annotated.vcf.gz Chromosome11:​5532312-5532957+tabix -p vcf /home/mkatari/​Genotypes2015.annotated.vcf.gz Chromosome11:​5532312-5532957 
 +</​code>​
mkatari-bioinformatics-august-2013-vcfregion.txt · Last modified: 2015/05/21 16:43 by mkatari