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minimap2-software [2018/11/04 19:04] (current)
aorth created
Line 1: Line 1:
 +====== minimap2 ======
 +A versatile pairwise aligner for genomic and spliced nucleotide sequences.
  
 +===== Information =====
 +
 +  * Latest version: 2.13
 +  * Added: November, 2018
 +  * Link: https://​lh3.github.io/​minimap2/​
 +
 +===== Usage =====
 +
 +See versions of minimap2 that are available:
 +<​code>​$ module avail minimap2</​code>​
 +
 +Load one version into your environment and run it:
 +<​code>​$ module load minimap2/​2.13
 +$ minimap2</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ wget https://​github.com/​lh3/​minimap2/​releases/​download/​v2.13/​minimap2-2.13_x64-linux.tar.bz2
 +$ tar xf minimap2-2.13_x64-linux.tar.bz2
 +$ sudo mkdir -p /​export/​apps/​minimap2/​2.13
 +$ sudo cp -r minimap2-2.13_x64-linux/​* /​export/​apps/​minimap2/​2.13</​code>​
minimap2-software.txt · Last modified: 2018/11/04 19:04 by aorth