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minimap2-software

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences.

Information

Usage

See versions of minimap2 that are available:

$ module avail minimap2

Load one version into your environment and run it:

$ module load minimap2/2.22
$ minimap2

Installation

Notes from the sysadmin during installation:

$ wget https://github.com/lh3/minimap2/releases/download/v2.22/minimap2-2.22_x64-linux.tar.bz2
$ tar xf minimap2-2.22_x64-linux.tar.bz2
$ sudo mkdir -p /export/apps/minimap2/2.22/bin
$ cd minimap2-2.22_x64-linux
$ sudo cp README.md LICENSE.txt /export/apps/minimap2/2.22
$ sudo cp minimap2
$ sudo cp minimap2 /export/apps/minimap2/2.22/bin
minimap2-software.txt · Last modified: 2021/08/25 12:17 by aorth