A versatile pairwise aligner for genomic and spliced nucleotide sequences.
See versions of minimap2 that are available:
$ module avail minimap2
Load one version into your environment and run it:
$ module load minimap2/2.22 $ minimap2
Notes from the sysadmin during installation:
$ wget https://github.com/lh3/minimap2/releases/download/v2.22/minimap2-2.22_x64-linux.tar.bz2 $ tar xf minimap2-2.22_x64-linux.tar.bz2 $ sudo mkdir -p /export/apps/minimap2/2.22/bin $ cd minimap2-2.22_x64-linux $ sudo cp README.md LICENSE.txt /export/apps/minimap2/2.22 $ sudo cp paftools.js k8 minimap2 /export/apps/minimap2/2.22/bin