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minimap2-software

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences.

Information

Usage

See versions of minimap2 that are available:

$ module avail minimap2

Load one version into your environment and run it:

$ module load minimap2/2.13
$ minimap2

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/lh3/minimap2/releases/download/v2.13/minimap2-2.13_x64-linux.tar.bz2
$ tar xf minimap2-2.13_x64-linux.tar.bz2
$ sudo mkdir -p /export/apps/minimap2/2.13
$ sudo cp -r minimap2-2.13_x64-linux/* /export/apps/minimap2/2.13
minimap2-software.txt · Last modified: 2018/11/04 19:04 by aorth