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masurca-software [2014/06/11 13:05] aorth created |
masurca-software [2019/04/01 15:27] (current) aorth |
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| ====== MaSuRCA ====== | ====== MaSuRCA ====== | ||
| - | MaSuRCA | + | The MaSuRCA |
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: | + | * Version: |
| - | * Added: | + | * Added: |
| - | * Link: http://www.genome.umd.edu/masurca.html | + | * Updated: April, 2019 |
| + | * Link: https://github.com/ | ||
| ===== Usage ===== | ===== Usage ===== | ||
| + | See versions of masurca which are available: | ||
| - | === See versions of masurca | + | < |
| - | < | + | |
| + | Load one version into your environment and run it: | ||
| + | < | ||
| + | $ masurca</ | ||
| ===== Installation ====== | ===== Installation ====== | ||
| Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
| - | < | + | < |
| - | tar zxf MaSuRCA-2.2.1.tar.gz | + | $ wget https://github.com/alekseyzimin/masurca/ |
| - | cd /tmp/MaSuRCA-2.2.1/ | + | $ tar xf MaSuRCA-3.3.1.tar.gz |
| - | sudo mkdir -p / | + | $ cd MaSuRCA-3.3.1 |
| - | sudo chown aorth / | + | $ sudo mkdir / |
| - | scl enable devtoolset-1.1 bash | + | $ sudo chown aorth / |
| - | DEST=/ | + | $ sudo yum install perl-Env.noarch |
| - | sudo chown -R root:root / | + | $ DEST=/ |
| + | $ sudo chown -R root:root / | ||