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mash

Fast genome and metagenome distance estimation using MinHash.

Usage

Show all available versions of mash:

$ module avail mash

Load a particular version of mash and run it:

$ module load mash/2.0
$ mash

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/marbl/Mash/releases/download/v2.0/mash-Linux64-v2.0.tar
$ tar xf mash-Linux64-v2.0.tar
$ sudo mkdir -p /export/apps/mash/2.0/bin
$ sudo cp mash-Linux64-v2.0/mash /export/apps/mash/2.0/bin
mash-software.txt · Last modified: 2018/01/15 17:04 by aorth