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list-of-software [2018/06/12 18:07]
aorth
list-of-software [2018/07/22 19:22] (current)
aorth
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 |[[gmap-software|gmap]]|2015-12-31|''​module load gmap/​2015-12-31''​| | |[[gmap-software|gmap]]|2015-12-31|''​module load gmap/​2015-12-31''​| |
 |[[grom-rd-software|grom-rd]]|1.0|''​module load grom-rd/​1.0''​| | |[[grom-rd-software|grom-rd]]|1.0|''​module load grom-rd/​1.0''​| |
 +|[[gromacs-software|gromacs]]|2018.2|''​module load gromacs/​2018.2''​| |
 |[[groovy-software|groovy]]|2.4.9|''​module load groovy/​2.4.9''​| | |[[groovy-software|groovy]]|2.4.9|''​module load groovy/​2.4.9''​| |
 |[[gsea-software|GSEA]]|2.2.3|''​module load gsea/​2.2.3''​| | |[[gsea-software|GSEA]]|2.2.3|''​module load gsea/​2.2.3''​| |
Line 133: Line 134:
 |[[masurca-software|masurca]]|2.3.2|''​module load masurca/​2.3.2''​| | |[[masurca-software|masurca]]|2.3.2|''​module load masurca/​2.3.2''​| |
 |maximus|0.2|''​module load maximus/​0.2''​| | |maximus|0.2|''​module load maximus/​0.2''​| |
 +|[[mcl-software|mcl]]|14-137|''​module load mcl/​14-137''​| |
 |[[megahit-software|megahit]]|git-02102e1b|''​module load megahit/​git-02102e1b''​| | |[[megahit-software|megahit]]|git-02102e1b|''​module load megahit/​git-02102e1b''​| |
 |megan|4.70.4|''​module load megan/​4.70.4''​| | |megan|4.70.4|''​module load megan/​4.70.4''​| |
Line 186: Line 188:
 |qdd|3_beta|''​module load qdd/​3_beta''​| | |qdd|3_beta|''​module load qdd/​3_beta''​| |
 |[[qiime-software|qiime]]|1.9.1|''​module load qiime/​1.9.1''​| | |[[qiime-software|qiime]]|1.9.1|''​module load qiime/​1.9.1''​| |
-|[[qiime2-software|qiime2]]|2018.4|''​module load qiime2/​2018.4''​| |+|[[qiime2-software|qiime2]]|2018.6|''​module load qiime2/​2018.6''​| |
 |[[quast-software|quast]]|4.5|''​module load quast/​4.5''​| | |[[quast-software|quast]]|4.5|''​module load quast/​4.5''​| |
 |[[quorum-software|Quorum]]|1.1.1|''​module load quorum/​1.1.1''​| | |[[quorum-software|Quorum]]|1.1.1|''​module load quorum/​1.1.1''​| |
-|[[r-software|R]]|3.4.4|''​module load R/3.4.4''​| |+|[[r-software|R]]|3.5.1|''​module load R/3.5.1''​| |
 |[[rmblast-software|rmblast]]|2.2.28|''​module load rmblast/​2.2.28''​| | |[[rmblast-software|rmblast]]|2.2.28|''​module load rmblast/​2.2.28''​| |
 |rstudio|v0.97.551|''​module load rstudio/​v0.97.551''​| | |rstudio|v0.97.551|''​module load rstudio/​v0.97.551''​| |
Line 266: Line 268:
 |[[w2rap-software|w2rap]]|git-60781b6c|''​module load w2rap/​git-60781b6c''​| | |[[w2rap-software|w2rap]]|git-60781b6c|''​module load w2rap/​git-60781b6c''​| |
 |[[w2rap-contigger-software|w2rap-contigger]]|git-a43f5a05|''​module load w2rap-contigger/​git-a43f5a05''​| | |[[w2rap-contigger-software|w2rap-contigger]]|git-a43f5a05|''​module load w2rap-contigger/​git-a43f5a05''​| |
 +|[[whatshap-software|whatshap]]|0.16|''​module load whatshap/​0.16''​| |
 |[[wise-software|wise]]|2.4.1|''​module load wise/​2.4.1''​| | |[[wise-software|wise]]|2.4.1|''​module load wise/​2.4.1''​| |
  
 The source code for all environment modules can be found in [[https://​github.com/​ilri/​hpc-environment-modules|ILRI'​s GitHub repository]]. The source code for all environment modules can be found in [[https://​github.com/​ilri/​hpc-environment-modules|ILRI'​s GitHub repository]].
list-of-software.1528816030.txt.gz · Last modified: 2018/06/12 18:07 by aorth