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lighter-software

lighter

Lighter is a kmer-based error correction method for whole genome sequencing data.

Information

Usage

See versions of lighter which are available:

$ module avail lighter

Load one version into your environment and run it:

$ module load lighter/1.1.2
$ lighter

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ git clone https://github.com/mourisl/Lighter.git
$ cd Lighter
$ git checkout v1.1.2
$ make
$ sudo mkdir -p /export/apps/lighter/1.1.2/bin
$ sudo cp lighter /export/apps/lighter/1.1.2/bin
$ sudo cp LICENSE README.md /export/apps/lighter/1.1.2
lighter-software.txt · Last modified: 2019/02/15 02:35 by aorth