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kaiju-software [2016/11/23 16:34] (current)
joguya created
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 +====== Kaiju ======
  
 +Kaiju is a program for the taxonomic classification of high-throughput sequencing reads, e.g., Illumina or Roche/454, from whole-genome sequencing of metagenomic DNA.
 +
 +===== Information =====
 +
 +  * Latest Version: 1.4.4
 +  * Added: November, 2016
 +  * Link: http://​kaiju.binf.ku.dk/​
 +  ​
 +===== Usage =====
 +
 +See which versions of kaiju are available:
 +<​code>​$ module avail kaiju
 +</​code>​
 +
 +Load kaiju
 +<​code>​$ module load kaiju/​1.4.4</​code>​
 +
 +===== Installation ======
 +
 +Notes from the sysadmin during installation:​
 +<​code>​
 +$ cd /tmp
 +$ wget https://​github.com/​bioinformatics-centre/​kaiju/​releases/​download/​v1.4.4/​kaiju-1.4.4-linux-x86_64.tar.gz
 +$ tar -xvf kaiju-1.4.4-linux-x86_64.tar.gz ​
 +$ cd kaiju-v1.4.4-linux-x86_64-static
 +$ sudo mkdir -p /​export/​apps/​kaiju/​1.4.4/​
 +$ sudo cp -r . /​export/​apps/​kaiju/​1.4.4/​
 +</​code>​
kaiju-software.txt · Last modified: 2016/11/23 16:34 by joguya