Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.

• Latest version: 2.2.9
• Added: March, 2015
• Updated: March, 2018
• Link: https://github.com/gmarcais/Jellyfish

See versions of jellyfish which are available:

$ module avail jellyfish

Load one version of jellyfish into your environment and run it:

$ module load jellyfish/2.2.9
$ jellyfish

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/gmarcais/Jellyfish/releases/download/v2.2.9/jellyfish-2.2.9-linux-static
$ chmod +x jellyfish-2.2.9-linux-static
$ sudo mkdir -p /export/apps/jellyfish/2.2.9/bin
$ sudo cp jellyfish-2.2.9-linux-static /export/apps/jellyfish/2.2.9/bin/jellyfish