Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.
See versions of jellyfish which are available:
$ module avail jellyfish
Load one version of jellyfish into your environment and run it:
$ module load jellyfish/2.2.9 $ jellyfish
Notes from the sysadmin during installation:
$ cd /tmp $ wget https://github.com/gmarcais/Jellyfish/releases/download/v2.2.9/jellyfish-2.2.9-linux-static $ chmod +x jellyfish-2.2.9-linux-static $ sudo mkdir -p /export/apps/jellyfish/2.2.9/bin $ sudo cp jellyfish-2.2.9-linux-static /export/apps/jellyfish/2.2.9/bin/jellyfish