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jellyfish-software

Jellyfish

Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.

Information

Usage

See versions of jellyfish which are available:

$ module avail jellyfish

Load one version of jellyfish into your environment and run it:

$ module load jellyfish/2.2.9
$ jellyfish

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/gmarcais/Jellyfish/releases/download/v2.2.9/jellyfish-2.2.9-linux-static
$ chmod +x jellyfish-2.2.9-linux-static
$ sudo mkdir -p /export/apps/jellyfish/2.2.9/bin
$ sudo cp jellyfish-2.2.9-linux-static /export/apps/jellyfish/2.2.9/bin/jellyfish
jellyfish-software.txt · Last modified: 2018/03/27 17:10 by aorth