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igvtools-software [2017/12/26 17:55]
aorth created
igvtools-software [2017/12/26 18:05] (current)
aorth
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   * Latest Version: 2.3.98   * Latest Version: 2.3.98
-  * Updated: ​February, 2017+  * Updated: ​December, 2017
   * Link: https://​software.broadinstitute.org/​software/​igv   * Link: https://​software.broadinstitute.org/​software/​igv
  
 ===== Usage ===== ===== Usage =====
- 
 See which versions of igvtools are available: See which versions of igvtools are available:
 <​code>​$ module avail igvtools</​code>​ <​code>​$ module avail igvtools</​code>​
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 Load one version into your environment and run it: Load one version into your environment and run it:
 <​code>​$ module load igvtools/​2.3.98 <​code>​$ module load igvtools/​2.3.98
-igv.sh</​code>​+igvtools</​code>​
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​$ wget http://​data.broadinstitute.org/​igv/​projects/​downloads/​2.4/IGV_2.4.5.zip +<​code>​$ wget http://​data.broadinstitute.org/​igv/​projects/​downloads/​2.3/igvtools_2.3.98.zip 
-$ sudo mkdir -p /​export/​apps/​igv/2.4.5 +$ unzip igvtools_2.3.98.zip 
-$ sudo cp -r IGV_2.4.5/*  /​export/​apps/​igv/2.4.5 +$ sudo mkdir -p /​export/​apps/​igvtools/2.3.98 
-$ sudo chmod -x /​export/​apps/​igv/2.4.5/igv.{bat,command}</​code>​+$ sudo cp -r IGVTools/* /​export/​apps/​igvtools/2.3.98 
 +$ sudo chmod -x /​export/​apps/​igvtools/2.3.98/*.bat /​export/​apps/​igvtools/​2.3.98/​*.command</​code>​
igvtools-software.txt · Last modified: 2017/12/26 18:05 by aorth