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igblast-software

IgBLAST

IgBLAST was developed at NCBI to facilitate analysis of immunoglobulin variable domain sequences but has recently been extended to perform analysis for T cell receptor (TR) sequences.

Information

Usage

See which versions of igblast are available:

$ module avail igblast

Load igblast

$ module load igblast/1.6.0

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.6.0/ncbi-igblast-1.6.0-src.zip
$ unzip ncbi-igblast-1.6.0-src.zip
$ cd ncbi-igblast-1.6.0-src/c++
$ sudo mkdir -p /export/apps/igblast/1.6.0/
$ sudo chown -R joguya:joguya /export/apps/igblast/1.6.0/
$ scl enable devtoolset-2 bash
$ ./configure --prefix=/export/apps/igblast/1.6.0/
$ make
$ make install
$ sudo chown -R root:root /export/apps/igblast/1.6.0/
igblast-software.txt · Last modified: 2016/09/14 12:17 by joguya