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+====== hypo ======
+HyPo--a Hybrid Polisher-- utilises short as well as long reads within a single run to polish a long reads assembly of small and large genomes. It exploits unique genomic kmers to selectively polish segments of contigs using partial order alignment of selective read-segments. As demonstrated on human genome assemblies, Hypo generates significantly more accurate polished assembly in about one-third time with about half the memory requirements in comparison to contemporary widely used polishers like Racon.
+===== Information =====
+  * Version: 1.0.3
+  * Added: January, 2021
+  * Link: https://github.com/kensung-lab/hypo
+===== Usage =====
+See versions of hypo which are available:
+<code>$ module avail hypo</code>
+Load one version into your environment and run it:
+<code>$ module load hypo/1.0.3
+$ hypo</code>
+===== Installation ======
+Notes from the sysadmin during installation:
+<code>$ cd /tmp
+$ git clone --recursive https://github.com/kensung-lab/hypo.git -b v1.0.3
+$ cd hypo
+# Install a newer compiler for C++17 features in hypo
+$ sudo yum install devtoolset-7-gcc devtoolset-7-gcc-gfortran devtoolset-7-libquadmath-devel devtoolset-7-gcc-c++
+$ scl enable devtoolset-7 bash
+$ mkdir build
+$ cd build
+$ cmake3 -DCMAKE_BUILD_TYPE=Release ..
+$ make -j4
+$ sudo mkdir -p /export/apps/hypo/1.0.3/bin
+$ sudo cp bin/hypo /export/apps/hypo/1.0.3/bin</code>
+**Note:** I had to modify the CMakeLists.txt file to hard code our global htslib, see: https://github.com/kensung-lab/hypo/issues/23

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