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htslib-software [2017/12/24 18:35] aorth |
htslib-software [2018/06/01 21:52] (current) aorth |
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===== Information ===== | ===== Information ===== | ||
- | * Latest Version: 1.6 | + | * Latest Version: 1.8 |
* Added: March, 2015 | * Added: March, 2015 | ||
- | * Updated: Оctober, 2017 | + | * Updated: June, 2018 |
* Link: https://github.com/samtools/htslib | * Link: https://github.com/samtools/htslib | ||
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Load one version into your environment: | Load one version into your environment: | ||
- | <code>$ module load htslib/1.6</code> | + | <code>$ module load htslib/1.8</code> |
===== Installation ====== | ===== Installation ====== | ||
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<code>$ cd /tmp | <code>$ cd /tmp | ||
- | $ wget https://github.com/samtools/htslib/releases/download/1.6/htslib-1.6.tar.bz2 | + | $ wget https://github.com/samtools/htslib/releases/download/1.8/htslib-1.8.tar.bz2 |
- | $ tar xf htslib-1.6.tar.bz2 | + | $ tar xf htslib-1.8.tar.bz2 |
- | $ cd htslib-1.6 | + | $ cd htslib-1.8 |
- | $ ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.6 | + | $ ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.8 |
$ make | $ make | ||
- | $ sudo mv /export/apps/htslib/1.6 /export/apps/htslib/1.6.old | + | $ sudo mkdir /export/apps/htslib/1.8 |
- | $ sudo mkdir /export/apps/htslib/1.6 | + | $ sudo chown aorth:aorth /export/apps/htslib/1.8 |
- | $ sudo chown aorth /export/apps/htslib/1.6 | + | |
$ make install | $ make install | ||
- | $ sudo chown -R root:root /export/apps/htslib/1.6</code> | + | $ sudo chown -R root:root /export/apps/htslib/1.8</code> |