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graphmap-software [2018/11/04 19:05] (current)
aorth created
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 +====== graphmap ======
 +A highly sensitive and accurate mapper for long, error-prone reads.
  
 +===== Information =====
 +
 +  * Latest version: 0.5.2
 +  * Added: November, 2018
 +  * Link: https://​github.com/​isovic/​graphmap
 +
 +===== Usage =====
 +
 +See versions of graphmap that are available:
 +<​code>​$ module avail graphmap</​code>​
 +
 +Load one version into your environment and run it:
 +<​code>​$ module load graphmap/​0.5.2
 +$ graphmap</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ git clone https://​github.com/​isovic/​graphmap.git
 +$ cd graphmap
 +$ make modules
 +$ sudo yum install libstdc++-static.x86_64
 +$ make
 +$ sudo yum remove libstdc++-static.x86_64
 +$ sudo mkdir -p /​export/​apps/​graphmap/​0.5.2
 +$ sudo cp -r doc LICENCE README.md /​export/​apps/​graphmap/​0.5.2
 +$ sudo mkdir -p /​export/​apps/​graphmap/​0.5.2/​bin
 +$ sudo cp bin/​Linux-x64/​graphmap /​export/​apps/​graphmap/​0.5.2/​bin</​code>​
graphmap-software.txt · Last modified: 2018/11/04 19:05 by aorth