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gffread-software [2017/02/13 15:02] (current)
joguya created
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 +====== GFFRead ======
 +
 +GFFRead is a GFF/GTF parsing utility providing format conversions,​ region filtering, FASTA sequence extraction.
 +
 +===== Information =====
 +
 +  * Version: 0.9.6
 +  * Added: February, 2017
 +  * Link: https://​github.com/​gpertea/​gffread
 +
 +===== Usage =====
 +
 +See which versions of gffread are available:
 +<​code>​$ module avail gffread</​code>​
 +
 +Load gffread
 +<​code>​$ module load gffread/​0.9.6</​code>​
 +
 +===== Installation ======
 +
 +Notes from the sysadmin during installation:​
 +
 +<​code>​
 +$ cd /tmp
 +$ git clone https://​github.com/​gpertea/​gclib
 +$ git clone https://​github.com/​gpertea/​gffread
 +$ cd gffread
 +$ make
 +$ sudo cp -v gffread /​export/​apps/​gffread/​0.9.6/​
 +</​code>​
  
gffread-software.txt · Last modified: 2017/02/13 15:02 by joguya