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gffread-software

GFFRead

GFFRead is a GFF/GTF parsing utility providing format conversions, region filtering, FASTA sequence extraction.

Information

Usage

See which versions of gffread are available:

$ module avail gffread

Load gffread

$ module load gffread/0.9.6

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ git clone https://github.com/gpertea/gclib
$ git clone https://github.com/gpertea/gffread
$ cd gffread
$ make
$ sudo cp -v gffread /export/apps/gffread/0.9.6/
gffread-software.txt · Last modified: 2017/02/13 15:02 by joguya