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freebayes-software [2016/03/22 11:15] (current)
joguya created
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 +====== FreeBayes ======
  
 +Bayesian haplotype-based polymorphism discovery and genotyping
 +
 +===== Information =====
 +
 +  * Version: 1.0.2
 +  * Added: March, 2016
 +  * Link: https://​github.com/​ekg/​freebayes
 +
 +===== Usage =====
 +
 +See which versions of freebayes are available:
 +<​code>​$ module avail freebayes</​code>​
 +
 +Load freebayes
 +<​code>​$ module load freebayes/​1.0.2</​code>​
 +
 +===== Installation ======
 +
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ git clone --recursive git://​github.com/​ekg/​freebayes.git
 +$ cd freebayes/
 +$ git checkout v1.0.2
 +$ make
 +$ sudo mkdir -p /​export/​apps/​freebayes/​1.0.2
 +$ sudo cp bin/​freebayes bin/​bamleftalign /​export/​apps/​freebayes/​1.0.2
 +</​code>​
freebayes-software.txt · Last modified: 2016/03/22 11:15 by joguya