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fastqc-software [2015/07/23 17:24]
joguya
fastqc-software [2017/02/05 12:37] (current)
joguya
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 ===== Information ===== ===== Information =====
  
-  * Version: 0.11.3+  * Latest version: 0.11.5
   * Added: December, 2014   * Added: December, 2014
-  * Updated: ​July2015+  * Updated: ​February2017
   * Link: http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​   * Link: http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​
  
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 === Load and run === === Load and run ===
-<​code>​$ module load fastqc/​0.11.3+<​code>​$ module load fastqc/​0.11.5
 $ fastqc</​code>​ $ fastqc</​code>​
  
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 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​$ wget http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​fastqc_v0.11.3.zip +<​code>​ 
-unzip  fastqc_v0.11.3.zip +$ cd /tmp 
-cd FastQC/ +$ wget http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​fastqc_v0.11.5.zip 
-sudo mkdir /​export/​apps/​fastqc/​0.11.3 +unzip fastqc_v0.11.5.zip 
-sudo cp -r . /​export/​apps/​fastqc/​0.11.+cd FastQC/ 
-sudo chmod +x /export/apps/​fastqc/​0.11.3/​fastqc</​code>​+$ sed -i '​s#/​usr/​bin/​perl#/​usr/​bin/​env perl#' fastqc 
 +$ chmod +x fastqc 
 +sudo mkdir /​export/​apps/​fastqc/​0.11.5/ 
 +sudo cp -r . /​export/​apps/​fastqc/​0.11.5/ 
 +</​code>​
fastqc-software.txt · Last modified: 2017/02/05 12:37 by joguya