A quality control tool for high throughput sequence data.

• Latest version: 0.11.5
• Added: December, 2014
• Updated: February, 2017
• Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/

$ module avail fastqc

$ module load fastqc/0.11.5
$ fastqc

Notes from the sysadmin during installation:

$ cd /tmp
$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.5.zip
$ unzip fastqc_v0.11.5.zip
$ cd FastQC/
$ sed -i 's#/usr/bin/perl#/usr/bin/env perl#' fastqc
$ chmod +x fastqc
$ sudo mkdir /export/apps/fastqc/0.11.5/
$ sudo cp -r . /export/apps/fastqc/0.11.5/