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--- fastqc-software [2015/07/23 14:18]
joguya [Information]
+++ fastqc-software [2018/09/28 12:22] (current)
aorth
@@ Line 4: / Line 4: @@
 ===== Information =====
-  * Version: 0.11.2
+  * Latest version: 0.11.7
   * Added: December, 2014
-  * Updated: July, 2015
+  * Updated: September, 2018
   * Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
 ===== Usage =====
-=== See versions of fastqc which are available ===
+See versions of fastqc which are available:
 <code>$ module avail fastqc</code>
-=== Load and run ===
+Load one version into your environment and run it:
-<code>$ module load fastqc/0.11.3
+<code>$ module load fastqc/0.11.7
 $ fastqc</code>
@@ Line 21: / Line 21: @@
 Notes from the sysadmin during installation:
-<code>$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.3.zip
+<code>$ cd /tmp
-unzip  fastqc_v0.11.3.zip
+$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.7.zip
-cd FastQC/
+$ unzip fastqc_v0.11.7.zip
-sudo mkdir /export/apps/fastqc/0.11.3
+$ sudo cp -r FastQC /export/apps/fastqc/0.11.7
-sudo cp -r . /export/apps/fastqc/0.11.3
+$ sudo chmod +x /export/apps/fastqc/0.11.7/fastqc</code>
-sudo chmod +x /export/apps/fastqc/0.11.3/fastqc</code>

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