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fastqc-software [2014/12/05 14:07]
aorth created
fastqc-software [2018/09/28 12:22] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 0.11.2+  * Latest version: 0.11.7
   * Added: December, 2014   * Added: December, 2014
 +  * Updated: September, 2018
   * Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/   * Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
  
 ===== Usage ===== ===== Usage =====
  
-=== See versions of fastqc which are available ===+See versions of fastqc which are available:
 <code>$ module avail fastqc</code> <code>$ module avail fastqc</code>
  
-=== Load and run === +Load one version into your environment and run it: 
-<code>$ module load fastqc/0.11.2+<code>$ module load fastqc/0.11.7
 $ fastqc</code> $ fastqc</code>
  
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 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ cd ~/src +<code>$ cd /tmp 
-$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.2.zip +$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.7.zip 
-$ unzip fastqc_v0.11.2.zip +$ unzip fastqc_v0.11.7.zip 
-$ sudo cp -r FastQC/export/apps/fastqc/0.11.2 +$ sudo cp -r FastQC /export/apps/fastqc/0.11.7 
-$ sudo chmod +x /export/apps/fastqc/0.11.2/fastqc</code>+$ sudo chmod +x /export/apps/fastqc/0.11.7/fastqc</code>
fastqc-software.1417788471.txt.gz · Last modified: 2014/12/05 14:07 by aorth