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fastqc-software [2014/12/05 17:07]
aorth created
fastqc-software [2018/09/28 15:22] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 0.11.2+  * Latest version: 0.11.7
   * Added: December, 2014   * Added: December, 2014
 +  * Updated: September, 2018
   * Link: http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​   * Link: http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​
  
 ===== Usage ===== ===== Usage =====
  
-=== See versions of fastqc which are available ​===+See versions of fastqc which are available:
 <​code>​$ module avail fastqc</​code>​ <​code>​$ module avail fastqc</​code>​
  
-=== Load and run === +Load one version into your environment ​and run it: 
-<​code>​$ module load fastqc/​0.11.2+<​code>​$ module load fastqc/​0.11.7
 $ fastqc</​code>​ $ fastqc</​code>​
  
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 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​$ cd ~/src +<​code>​$ cd /tmp 
-$ wget http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​fastqc_v0.11.2.zip +$ wget http://​www.bioinformatics.babraham.ac.uk/​projects/​fastqc/​fastqc_v0.11.7.zip 
-$ unzip fastqc_v0.11.2.zip +$ unzip fastqc_v0.11.7.zip 
-$ sudo cp -r FastQC/​export/​apps/​fastqc/​0.11.2 +$ sudo cp -r FastQC /​export/​apps/​fastqc/​0.11.7 
-$ sudo chmod +x /​export/​apps/​fastqc/​0.11.2/​fastqc</​code>​+$ sudo chmod +x /​export/​apps/​fastqc/​0.11.7/​fastqc</​code>​
fastqc-software.1417788471.txt.gz · Last modified: 2014/12/05 17:07 by aorth