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fastqc-software

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fastqc

A quality control tool for high throughput sequence data.

Information

Usage

See versions of fastqc which are available:

$ module avail fastqc

Load one version into your environment and run it:

$ module load fastqc/0.11.7
$ fastqc

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.7.zip
$ unzip fastqc_v0.11.7.zip
$ sudo cp -r FastQC /export/apps/fastqc/0.11.7
$ sudo chmod +x /export/apps/fastqc/0.11.7/fastqc
fastqc-software.txt · Last modified: 2018/09/28 15:22 by aorth