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fastphase-software [2017/07/03 14:08] (current)
aorth created
Line 1: Line 1:
 +====== fastPHASE ======
 +fastPHASE is a program to estimate missing genotypes and unobserved haplotypes.
  
 +===== Information =====
 +
 +  * Latest version: 1.4.8
 +  * Added: July, 2017
 +  * Link: http://​scheet.org/​software.html
 +
 +===== Usage =====
 +
 +See versions of fastPHASE which are available:
 +<​code>​$ module avail fastPHASE</​code>​
 +
 +Load and run:
 +<​code>​$ module load fastPHASE/​1.4.8
 +$ fastPHASE</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ wget http://​scheet.org/​code/​Linuxfp.tar.gz
 +$ tar xf Linuxfp.tar.gz
 +$ chmod +x fastPHASE
 +# check which version this is
 +$ ./fastPHASE -h
 +$ sudo mkdir -p /​export/​apps/​fastPHASE/​1.4.8/​bin
 +$ sudo cp fastPHASE /​export/​apps/​fastPHASE/​1.4.8/​bin</​code>​
fastphase-software.txt · Last modified: 2017/07/03 14:08 by aorth