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express-software

eXpress

eXpress is a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences.

Information

Usage

See versions of eXpress which are available:

$ module avail express

Load and run eXpress:

$ module load express/1.5.1
$ express

Installation

Notes from the sysadmin during installation:

$ wget http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-linux_x86_64.tgz
$ tar -xvf express-1.5.1-linux_x86_64.tgz
$ cd express-1.5.1-linux_x86_64
$ sudo mkdir -p /export/apps/express/1.5.1/
$ sudo cp -r . /export/apps/express/1.5.1/
express-software.txt · Last modified: 2015/11/02 14:36 by joguya