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easer-software [2016/05/23 10:35] (current)
joguya created
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 +====== EASER ======
 +
 +EASER(Ensembl Easy Sequence Retriever) is a python program based in PyCogent library for the homology-based retrieval of several sequence data types from [[http://​www.ensembl.org/​|Ensembl]].
 +
 +===== Information =====
 +
 +  * Version: 1.7.0
 +  * Added: May, 2016
 +  * Link: http://​easer.sourceforge.net/​
 +
 +===== Usage =====
 +
 +See which versions of easer are available:
 +<​code>​$ module avail easer</​code>​
 +
 +Load easer
 +<​code>​$ module load easer/​1.7.0</​code>​
 +
 +===== Installation ======
 +
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ scl enable devtoolset-2 bash
 +"​http://​downloads.sourceforge.net/​project/​easer/​Generic/​EASERv1.7.0.zip?​r=https%3A%2F%2Fsourceforge.net%2Fprojects%2Feaser%2F&​ts=1463986565&​use_mirror=tenet"​ -O easerv1.7.0.zip
 +$ unzip easerv1.7.0.zip ​
 +$ cd EASER_v1.7.0/​
 +$ sed -i "​1s/​.*/​\#​\!\/​usr\/​bin\/​env python/"​ easer.py
 +$ sudo mkdir -p /​export/​apps/​easer/​1.7.0/​
 +$ sudo cp -r . /​export/​apps/​easer/​1.7.0/​
 +</​code>​
  
easer-software.txt · Last modified: 2016/05/23 10:35 by joguya