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diamond-software [2017/07/23 11:14]
aorth
diamond-software [2017/07/23 11:25]
aorth
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 $ sudo cp diamond diamond_manual.pdf /​export/​apps/​diamond/​0.9.9</​code>​ $ sudo cp diamond diamond_manual.pdf /​export/​apps/​diamond/​0.9.9</​code>​
  
-===== Create Databases ===== +Diamond requires specially formatted databases, which you create using the ''​diamond makedb''​ subcommand. The input must be a FASTA file, but can be gzip compressed, for example the NR database from NCBI:
-Diamond requires specially formatted databases, which you create using ''​diamond makedb''​ subcommand. The input must be a FASTA file, but can be gzip compressed, for example the NR database from NCBI:+
  
 <​code>​$ wget ftp://​ftp.ncbi.nlm.nih.gov/​blast/​db/​FASTA/​nr.gz <​code>​$ wget ftp://​ftp.ncbi.nlm.nih.gov/​blast/​db/​FASTA/​nr.gz
diamond-software.txt · Last modified: 2018/11/04 16:06 by aorth