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cutadapt-software

cutadapt

Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

Information

Usage

See versions of cutadapt which are available

module avail cutadapt

Installation

Notes from the sysadmin during installation:

$ sudo mkdir -p /export/apps/cutadapt/v1.8.1
$ module load python/2.7.8
$ sudo chown aorth /export/apps/cutadapt/v1.8.1
$ pip install cutadapt --install-option="--prefix=/export/apps/cutadapt/v1.8.1"
$ sudo chown root:root /export/apps/cutadapt/v1.8.1
cutadapt-software.txt · Last modified: 2015/06/24 12:08 by aorth