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clonalframe-software

ClonalFrame

ClonalFrame infers bacterial microevolution using multilocus sequence data.

Information

Usage

See versions of ClonalFrame which are available:

$ module avail clonalframe

Load and run ClonalFrame:

$ module load clonalframe/1.2
$ ClonalFrame

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ scl enable devtoolset-2 bash
$ wget http://www.stats.ox.ac.uk/~didelot/files/ClonalFrame-1.2-Lin.zip
$ unzip ClonalFrame-1.2-Lin.zip
$ chmod 0755 ClonalFrame
$ sudo mkdir -p /export/apps/clonalframe/1.2
$ sudo cp ClonalFrame /export/apps/clonalframe/1.2/
clonalframe-software.txt · Last modified: 2015/09/16 12:54 by joguya