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changeo-software

Change-O

Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin sequences, and reconstructing germline sequences.

Information

Usage

See which versions of changeo are available:

$ module avail changeo

Load changeo into your environment:

$ module load changeo/1.0.0

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ sudo python3 -m venv /export/apps/changeo/1.0.0
$ sudo chown -R aorth /export/apps/changeo/1.0.0
$ source /export/apps/changeo/1.0.0/bin/activate
$ pip install changeo
$ sudo chown -R root:root /export/apps/changeo/1.0.0
changeo-software.txt · Last modified: 2020/06/10 18:10 by aorth