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bwa-software [2017/05/03 09:49] aorth |
bwa-software [2020/06/17 07:04] (current) aorth |
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| ===== Information ===== | ===== Information ===== | ||
| - | * Latest version: 0.7.15 | + | * Latest version: 0.7.17 |
| * Added: April, 2013 | * Added: April, 2013 | ||
| - | * Updated: | + | * Updated: |
| - | * Link: http://bio-bwa.sourceforge.net | + | * Link: https://github.com/lh3/bwa |
| ===== Usage ===== | ===== Usage ===== | ||
| - | === See versions of bwa which are available | + | See versions of bwa which are available: |
| - | < | + | |
| + | < | ||
| + | |||
| + | Load one version into your environment and run it: | ||
| + | |||
| + | < | ||
| ===== Installation ====== | ===== Installation ====== | ||
| Line 19: | Line 24: | ||
| < | < | ||
| $ cd /tmp | $ cd /tmp | ||
| - | $ wget -qO- "https://downloads.sourceforge.net/project/bio-bwa/ | + | $ wget https://github.com/lh3/bwa/ |
| - | $ cd bwa-0.7.15/ | + | $ tar xf bwa-0.7.17.tar.bz2 |
| - | $ scl enable devtoolset-2 bash | + | $ cd bwa-0.7.17 |
| $ make | $ make | ||
| - | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
| - | $ sudo cp bwa *.pl / | + | $ sudo cp bwa *.pl / |
| - | $ sudo cp -rv bwakit/ / | + | $ sudo cp -rv bwakit/ / |
| </ | </ | ||