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blobtools-software [2016/08/18 12:44] (current)
joguya created
Line 1: Line 1:
 +====== blobtools ======
  
 +A python application for the visualization of draft genome assemblies and general QC.
 +
 +===== Information =====
 +
 +  * Version: 0.9.19.3
 +  * Added: August, 2016
 +  * Link: https://​github.com/​DRL/​blobtools
 +
 +===== Usage =====
 +
 +See which versions of blobtools are available:
 +<​code>​$ module avail blobtools</​code>​
 +
 +Load blobtools
 +<​code>​$ module load blobtools/​0.9.19.3</​code>​
 +
 +===== Installation ======
 +
 +Notes from the sysadmin during installation:​
 +
 +<​code>​
 +- install docopt—a dependency of blobtools
 +$ cd /tmp
 +$ wget https://​github.com/​docopt/​docopt/​archive/​0.6.2.tar.gz
 +$ tar -xvf 0.6.2.tar.gz
 +$ cd docopt-0.6.2/​
 +$ sudo chown -R joguya:​joguya /​export/​apps/​python/​2.7.8/​
 +$ python setup.py build
 +$ python setup.py install
 +$ sudo chown -R root:root /​export/​apps/​python/​2.7.8/​
 +
 +- install blobtools
 +$ cd /tmp
 +$ cd https://​github.com/​DRL/​blobtools/​archive/​v0.9.19.3.tar.gz
 +$ tar -xvf v0.9.19.3.tar.gz
 +$ cd blobtools-0.9.19.3/​
 +$ sudo mkdir -p /​export/​apps/​blobtools/​0.9.19.3/​
 +$ sudo cp -r . /​export/​apps/​blobtools/​0.9.19.3/​
 +</​code>​
blobtools-software.txt · Last modified: 2016/08/18 12:44 by joguya