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biological-databases

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Biological sequence databases on the HPC

Some of the most common biological sequence databases are available on the HPC, for you to use with tools like BLAST, etc. Below you can find the list of them, their source URL and the last time they were updated, with links to the update scripts that our system administrator use to perform updates.

We endeavor to keep this list updated as the One True List™.

Name Version number Last updated Where it resides
NCBI nr/nt collection2.1.4end Nov 2018/export/data/bio/ncbi/blast/db
biological-databases.1552384401.txt.gz · Last modified: 2019/03/12 12:53 by jean-baka